org.simBio.bio.sarai_noma_2004.fourState
Class ODE
java.lang.Object
org.simBio.core.Component
org.simBio.core.Parameter
org.simBio.core.Composite
org.simBio.core.Reactor
org.simBio.bio.sarai_noma_2004.fourState.ODE
- All Implemented Interfaces:
- Node
- Direct Known Subclasses:
- MonteCarlo
public abstract class ODE
- extends Reactor
Created on 2003/10/30
- Version:
- $Revision: 1.1 $
- Author:
- Nobuaki Sarai
Constructor Summary |
ODE()
|
Method Summary |
protected void |
calculate(double t)
calculate state probability by ODE. |
protected void |
prepare()
read initial values from GUI. |
protected void |
setLinks()
set arias for gates |
Methods inherited from class org.simBio.core.Component |
addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
pAI
protected Node pAI
pAP
protected Node pAP
pRP
protected Node pRP
ODE
public ODE()
setLinks
protected void setLinks()
set arias for gates
- Overrides:
setLinks
in class Component
- See Also:
Component.setLinks()
prepare
protected void prepare()
- read initial values from GUI.
- Overrides:
prepare
in class Parameter
- See Also:
Component.prepare()
calculate
protected void calculate(double t)
- calculate state probability by ODE.
- Specified by:
calculate
in class Reactor
- Parameters:
t
-
Copyright © 2005 Cell/Biodinamics simulation project. All Rights Reserved.