org.simBio.bio.matsuoka_et_al_2004.molecule
Class Diffusion
java.lang.Object
org.simBio.core.Component
org.simBio.core.Parameter
org.simBio.core.Composite
org.simBio.core.Reactor
org.simBio.bio.matsuoka_et_al_2004.molecule.Diffusion
- All Implemented Interfaces:
- Node
public class Diffusion
- extends Reactor
calculation of diffusion equation.
- Since:
- rc20
- Version:
- $Log: Diffusion.java,v $
Revision 1.1 2005/11/01 06:32:38 mikaelwing
First version of simBio hosted on sourceforge, version 0.3
Revision 1.1 2005/09/12 04:57:10 sarai
rearrenge folder structure as a Maven style
Revision 1.2 2005/08/04 08:43:05 sarai
revise Javadoc to suppress Warnings
2005/02/01 09:50:01 Some comments were updated to make Javadoc.
2004/12/20 09:29:07 Type of the Oxygen is checked instead of using flag
2004/09/29 04:10:25 Created
- Author:
- SAITO Ryuta
- See Also:
XML example
explanation (Japanese, WORD doc)
Method Summary |
protected void |
calculate(double t)
write equations here, and calculate dy over dt. |
Methods inherited from class org.simBio.core.Component |
addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
internal
public Node internal
- internal concentration
external
public Node external
- external concentration
constant
public double constant
- rate constant of diffusion
Diffusion
public Diffusion()
calculate
protected void calculate(double t)
- Description copied from class:
Reactor
- write equations here, and calculate dy over dt.
計算中に呼び出される。
計算式を記載する。dy/dtをここで計算する。
- Specified by:
calculate
in class Reactor
- Parameters:
t
- elapsed time (ms)
Copyright © 2005 Cell/Biodinamics simulation project. All Rights Reserved.