org.simBio.bio.henriquez_et_al_2001
クラス GapJunction

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.henriquez_et_al_2001.GapJunction

すべての実装されたインタフェース:

Node

public class GapJunction
extends Reactor

Voltage-dependent gap junction model developed by Vogel and Weingart.

バージョン:

$Id: GapJunction.java,v 1.2 2007/10/24 01:26:05 nsarai Exp $

作成者:

Chiaki Oka

関連項目:

Vogel R and Weingart R, J Physiol, 1998 , Henriquez AP et al., Biophys J, 2001 , GapJunction.ja.doc (Japanese, WORD doc)

フィールドの概要

double	Acoef coefficient of rate constant alpha (ms-1)
double	Bcoef coefficient of rate constant beta (ms-1)
MathFunction	fVHL non-linear equation for calculating the voltage across hemichannel at HL state
MathFunction	fVLH non-linear equation for calculating the voltage across hemichannel at LH state
double	GH conductance at high state (pS)
Node	gHH conductance of HH state
Node	gHL conductance of HL state
double	GL conductance at low state (pS)
Node	gLH conductance of LH state
Node	gLL conductance of LL state
Node	nHH fraction of HH state
Node	nHL fraction of HL state
Node	nLH fraction of LH state
Node	nLL fraction of LL state
double	Va potential alpha (mV)
double	Vb potential beta (mV)
double	VH potential at high state (mV)
Node	VHL voltage across hemichannel at HL state (mV)
Node	Vj junctional potential (mV)
double	VL potential at low state (mV)
Node	VLH voltage across hemichannel at LH state (mV)

クラス org.simBio.core.Parameter から継承されたフィールド

value

コンストラクタの概要

GapJunction()

メソッドの概要

protected void

calculate(double t) calculate the unitary gap junction conductance (pS) which depends on transjunctional voltage

クラス org.simBio.core.Composite から継承されたメソッド

accept, getLink, getNode, getNodesIterator, getNodesSize

クラス org.simBio.core.Parameter から継承されたメソッド

addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField

クラス org.simBio.core.Component から継承されたメソッド

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

クラス java.lang.Object から継承されたメソッド

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

インタフェース org.simBio.core.Node から継承されたメソッド

addDydt, addValue, getValue, setValue

フィールドの詳細

Vj

public Node Vj

junctional potential (mV)

nHH

public Node nHH

fraction of HH state

nLH

public Node nLH

fraction of LH state

nHL

public Node nHL

fraction of HL state

nLL

public Node nLL

fraction of LL state

gHH

public Node gHH

conductance of HH state

gLH

public Node gLH

conductance of LH state

gHL

public Node gHL

conductance of HL state

gLL

public Node gLL

conductance of LL state

VH

public double VH

potential at high state (mV)

VL

public double VL

potential at low state (mV)

GH

public double GH

conductance at high state (pS)

GL

public double GL

conductance at low state (pS)

Acoef

public double Acoef

coefficient of rate constant alpha (ms-1)

Bcoef

public double Bcoef

coefficient of rate constant beta (ms-1)

Va

public double Va

potential alpha (mV)

Vb

public double Vb

potential beta (mV)

VHL

public Node VHL

voltage across hemichannel at HL state (mV)

VLH

public Node VLH

voltage across hemichannel at LH state (mV)

fVLH

public MathFunction fVLH

non-linear equation for calculating the voltage across hemichannel at LH state

fVHL

public MathFunction fVHL

non-linear equation for calculating the voltage across hemichannel at HL state

コンストラクタの詳細

GapJunction

public GapJunction()

メソッドの詳細

calculate

protected void calculate(double t)

calculate the unitary gap junction conductance (pS) which depends on transjunctional voltage

定義:

クラス Reactor 内の calculate

パラメータ:

t - elapsed time (ms)